Template,fragment# | Annealing | |||||
---|---|---|---|---|---|---|
# | Start(bp) | End(bp) | fromfirstPCR | “Forward” primer(5′–3′) | “Reverse” primer(5′–3′) | Temperature (°C) |
1 | 16569 | 25 | 1 | aTGCATGGAGAGCTCCCGTGAGTGG | CCCCTTAAATAAGACATCACGAT | 52 |
2 | 42 | 126 | 1 | aATTAACCACTCACGGGAGCTCTC | AGGATGAGGCAGGAATCAAAGAC | 55 |
4 | 131 | 181 | 1 | aCACCCTATGTCGCAGTATCTGTC | CACACTTTAGTAAGTATGTTCGC | 55 |
6 | 483 | 153 | 1 | aGGGGTTAGCAGCGGTGTGTGTGTG | TCCCACTCCCATACTACTAATCT | 55 |
7 | 530 | 633 | 1 | aTACCCAGCACACACACACCGCTG | CAAACCTATTTGTTTATGGGGTGA | 55 |
8 | 673 | 705 | 1 | aTTAGAGGGTGAACTCACTGGAAC | GGTTTGGTCCTAGCCTTTCTATT | 58 |
82 | 7031 | 1734 | 10 | aACGACACGTACTACGTTGTAGCC | AATATGATAGTGAAATGGATTTT | 52 |
84 | 7340 | 7416 | 10 | aCTTTCTTCCCACAACACTTTCTC | TCTCAAATCATGAAAATTATTAAT | 55 |
125 | 11029 | 11086 | 16 | aTTAGGAGGGGGGTTGTTAGGGGGT | CATCCCTCTACTATTTTTTAACC | 58 |
127 | 11193 | 11243 | 16 | aACCAGCCAGAACGCCTGAACGCA | GGTGTTGTGAGTGTAAATTAGTG | 55 |
128 | 11283 | 11311 | 16 | aTGTGCCTGCGTTCAGGCGTTCTGG | TAATCATATTTTATATCTTCTTC | 60 |
130 | 11437 | 11492 | 16 | aTTGACCCAGCGATGGGGGCTTCGA | GAGCCAACAACTTAATATGACTA | 55 |
176 | 15201 | 15257 | 22 | aAGAATCGTGTGAGGGTGGGACTGT | AGTAATTACAAACTTACTATCCG | 60 |
177 | 15274 | 15377 | 22 | aAGTAGACAGTCCCACCCTCACAC | GGTGATTTTATCGGAATGGGAGG | 60 |
178 | 15394 | 15448 | 22 | aCTAGGAATCACCTCCCATTCCGA | TAATGTCATTAAGGAGAGAAGGAA | 55 |
181 | 15761 | 15864 | 22 | aACCTCCTCATTCTAACCTGAATC | CAGGCCCATTTGAGTATTTTGTTT | 55 |
184 | 16080 | 16130 | 23 | aCAAGTATTGACTCACCCATCAAC | ACAGGTGGTCAAGTATTTATGGTA | 57 |
185 | 16170 | 16272 | 23 | aGTGGGTGAGGGGTGGCTTTGGAGT | CCAATCCACATCAAAACCCCCTC | 56 |
187 | 16263 | 16366 | 23 | aAACTGCAACTCCAAAGCCACCCC | CCCTATCTGAGGGGGGTCATCCAT | 58 |